Fungal Genomes

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(Genomes released and annotated by Genozymes)
(Genomes released and annotated by Genozymes)
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<tr><td>''Amorphotheca resinae''  DAOM194228 ([http://genome.fungalgenomics.ca/species/Amorphotheca_resinae_final_img.html description])</td>
<tr><td>''Amorphotheca resinae''  DAOM194228 ([http://genome.fungalgenomics.ca/species/Amorphotheca_resinae_final_img.html description])</td>
-
<td align="center">[http://genome.fungalgenomics.ca/gene_model_pages/org_index_gm.php?pred_name=Amore2p4 p4] </td>
+
<td align="center">[http://genome.fungalgenomics.ca//new_gene_model_pages/species_search_page.php?predname==Amore2p4 p4] </td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Amore2/ Amore2]</td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Amore2/ Amore2]</td>
</tr>
</tr>
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<tr><td width="50%">''Aureobasidium pullulans'' ATCC 62921</td>
<tr><td width="50%">''Aureobasidium pullulans'' ATCC 62921</td>
-
<td align="center">[http://genome.fungalgenomics.ca/gene_model_pages/org_index_gm.php?pred_name=Aurpu2p4 p4] </td>
+
<td align="center">[http://genome.fungalgenomics.ca//new_gene_model_pages/species_search_page.php?predname=Aurpu2p4 p4] </td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Aurpu2/ Aurpu2]</td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Aurpu2/ Aurpu2]</td>
</tr>
</tr>
<tr><td>''Calcarisporiella thermophila''  CBS 279.70 ([http://genome.fungalgenomics.ca/species/Calcarisporiella_thermophila_final_img.html description])</td>
<tr><td>''Calcarisporiella thermophila''  CBS 279.70 ([http://genome.fungalgenomics.ca/species/Calcarisporiella_thermophila_final_img.html description])</td>
-
<td align="center">[http://genome.fungalgenomics.ca/gene_model_pages/org_index_gm.php?pred_name=Calth2p4 p4]</td>
+
<td align="center">[http://genome.fungalgenomics.ca//new_gene_model_pages/species_search_page.php?predname=Calth2p4 p4]</td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Calth2/ Calth2]</td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Calth2/ Calth2]</td>
</tr>
</tr>
Line 40: Line 40:
<tr><td>''Corynascus thermophilus'' CBS 405.69 ( [http://genome.fungalgenomics.ca/species/Corynascus_thermophilus_final_img.html description] )
<tr><td>''Corynascus thermophilus'' CBS 405.69 ( [http://genome.fungalgenomics.ca/species/Corynascus_thermophilus_final_img.html description] )
<br> (now ''Myceliophthora ferusii'')</td>
<br> (now ''Myceliophthora ferusii'')</td>
-
<td align="center">[http://genome.fungalgenomics.ca/gene_model_pages/org_index_gm.php?pred_name=Corth2p4 p4]</td>
+
<td align="center">[http://genome.fungalgenomics.ca//new_gene_model_pages/species_search_page.php?predname=Corth2p4 p4]</td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Corth2/ Corth2]</td>
<td align="center">[http://gbrowse.fungalgenomics.ca/cgi-bin/gb2/gbrowse/Corth2/ Corth2]</td>
</tr>
</tr>

Revision as of 21:44, 28 March 2014

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Data available

Genomes released and annotated by Genozymes

Speciessearch gene modelsbrowse genome
Amorphotheca resinae DAOM194228 (description) p4 Amore2

Aspergillus niger NRRL3 (description)

NRRL3 Aspni_NRRL3
Aureobasidium pullulans ATCC 62921 p4 Aurpu2
Calcarisporiella thermophila CBS 279.70 (description) p4 Calth2
Corynascus thermophilus CBS 405.69 ( description )
(now Myceliophthora ferusii)
p4 Corth2
Myriococcum thermophilum CBS 398.93 ( description ) p4 Myrth2
Pseudocercosporella herpotrichoides CBS 494.80 ( description ) p4 Psehe2
Rhizomucor pusillus CBS 183.67 (description) p4 Rhipu1
Scytalidium thermophilum CBS 625.91 ( description ) p4 Scyth2
Talaromyces thermophilus NRRL 2155 ( description ) p4 Talth1
Thermoascus aurantiacus CBS 181.67 ( description ) p4 Theau2
Thermomyces lanuginosus ATCC 200065 ( description ) p4 Thela2
Trametes versicolor 52J ( description ) p4 Trave2

Publicly-available genomes re-annotated by Genozymes

Speciessearch genesbrowse genomegenome source
Aspergillus niger ATCC 1015 p7 Aspni3 JGI
Phanerochaete chrysosporium p7 Phach2 JGI

Additional genomes being sequenced for the Genozymes project

Acremonium thermophilum ATCC 24622
Chaetomium olivicolor CBS 102434
Chaetomium thermophilum ATCC 16451
Corynascus sepedonium ATCC 9787
Dactylomyces thermophilus ATCC 26413
Humicola hyalothermophila CBS 454.80
Malbranchea cinnamomea CBS 343.55
Myceliophthora hinnulea ATCC 52474
Paecilomyces byssochlamydoides NRRL 3658
Rhizomucor miehei CBS 182.67
Stilbella thermophila ATCC 22073
Talaromyces emersonii NRRL 3221
Thermomyces stellatus CBS 241.64
Thielavia australiensis ATCC 28236

Additional species of interest for the Genozymes project

Lentinula edodes ATCC 48564 ( description )
Melanocarpus albomyces ATCC 16460
Thermoascus aegyptiacus ATCC56490
Thermophymatospora fibuligera ATCC 62942

Publicly available fungal genomes

Speciesgenome source
Acremonium alcalophilum JCM 7366 ( description ) JGI
Aspergillus niger ATCC 1015 JGI
Gloeophyllum trabeum ATCC11539 ( description ) JGI
Sporotrichum thermophile ATCC 42464 ( description )
(now Myceliophthora thermophila )
JGI
Phanerochaete chrysosporium RP78 JGI
Thielavia terrestris NRRL 8126 JGI
Aspergillus niger CBS 513.88 NCBI
Chaetomium globosum CBS 148.51 Broad

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