Fungal Genomes

From Fungal Genomics

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====JGI-DOE Fungal genome sequences====
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====Public fungal genomes====
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: ''Acremonium alcalophilum''  JCM 7366  ( [http://genome.jgi-psf.org/Acral1_c3a/Acral1_c3a.home.html Genome project] )  ( [http://genome.fungalgenomics.ca/species/Acremonium_alcalophilum_final_img.html  description] )
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: ''Aspergillus niger'' ATCC 1015  ( [http://genome.jgi-psf.org/Aspni5/Aspni5.home.html Genome project] )
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: ''Gloeophyllum trabeum'' ATCC11539    ( [http://genome.jgi-psf.org/Glotr1_1/Glotr1_1.home.html Genome project] )  ( [http://genome.fungalgenomics.ca/species/Gloeophyllum_trabeum_final_img.html description] )
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:''Sporotrichum thermophile''  ATCC 42464 (now ''Myceliophthora thermophila'' ) ( [http://genome.jgi-psf.org/Spoth2/Spoth2.home.html Genome project] )  ( [http://genome.fungalgenomics.ca/species/Myceliophthora_thermophila_final_img.html description] )
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: ''Phanerochaete chrysosporium'' RP78  ( [http://genome.jgi-psf.org/Phchr1/Phchr1.home.html Genome project] )
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: ''Thielavia terrestris''  NRRL 8126 ( [http://genome.jgi-psf.org/Thite2/Thite2.home.html Genome project] )
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====Other completed fungal genome sequences====
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: ''Aspergillus niger'' CBS 513.88    ( [http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=Retrieve&list_uids=19263 Genome project] )
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: ''Chaetomium globosum'' CBS 148.51  ( [http://www.broadinstitute.org/annotation/genome/chaetomium_globosum.2/Home.html Genome project] )
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<tr><td width="50%">'''Species'''</td><td align="center">'''source'''</td><td align="center">'''description'''</td></tr>
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<tr><td>''Acremonium alcalophilum'' JCM 7366</td>
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<td align="center">[http://genome.jgi-psf.org/Acral1_c3a/Acral1_c3a.home.html JGI]</td>
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<td align="center">[http://genome.fungalgenomics.ca/species/Acremonium_alcalophilum_final_img.html ¤]</td></tr>
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<tr><td>''Aspergillus niger'' ATCC 1015</td>
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<td align="center">[http://genome.jgi-psf.org/Aspni5/Aspni5.home.html JGI]</td></tr>
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<tr><td>''Gloeophyllum trabeum'' ATCC11539</td>
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<td align="center">[http://genome.jgi-psf.org/Glotr1_1/Glotr1_1.home.html JGI]</td>
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<td align="center">[http://genome.fungalgenomics.ca/species/Gloeophyllum_trabeum_final_img.html ¤]</td></tr>
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<tr><td>''Sporotrichum thermophile''  ATCC 42464 (now ''Myceliophthora thermophila'' )</td>
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<td align="center">[http://genome.jgi-psf.org/Spoth2/Spoth2.home.html JGI]</td>
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<td align="center">[http://genome.fungalgenomics.ca/species/Myceliophthora_thermophila_final_img.html ¤]</td></tr>
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<tr><td>''Phanerochaete chrysosporium'' RP78</td>
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<td align="center">[http://genome.jgi-psf.org/Phchr1/Phchr1.home.html JGI]</td></tr>
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<tr><td>''Thielavia terrestris''  NRRL 8126</td>
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<td align="center">[http://genome.jgi-psf.org/Thite2/Thite2.home.html JGI]</td></tr>
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<tr><td>''Aspergillus niger'' CBS 513.88</td>
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<td align="center">[http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=Retrieve&list_uids=19263 NCBI]</td></tr>
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<tr><td>''Chaetomium globosum'' CBS 148.51</td>
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<td align="center">[http://www.broadinstitute.org/annotation/genome/chaetomium_globosum.2/Home.html Broad]</td></tr>
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</table>
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</blockquote>
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__NOTOC__
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Revision as of 11:14, 8 December 2012

| About | Genomes | Publications | Contact |


All genomes : ( Taxonomy Table )


Genomes released and annotated by Genozymes

Speciessearch genesbrowse genomedescription
Aureobasidium pullulans ATCC 62921¤¤n/a
Corynascus thermophilus CBS 405.69¤¤¤
Myriococcum thermophilum CBS 398.93¤¤ ¤
Pseudocercosporella herpotrichoides CBS 494.80 ¤¤¤
Scytalidium thermophilum CBS 625.91 ¤¤¤
Talaromyces thermophilus NRRL 2155¤¤ ¤
Thermoascus aurantiacus CBS 181.67 ¤¤¤
Thermomyces lanuginosus ATCC 200065 ¤ ¤¤
Trametes versicolor 52J ¤¤¤

Public genomes re-annotated by Genozymes

Speciessearch genesbrowse genomesource
Aspergillus niger ATCC 1015 p7 ¤ JGI
Phanerochaete chrysosporium p7 ¤ JGI

Projected dates to release new annotated genomes

Speciesrelease datedescription
Amorphotheca resinae DAOM194228 tba¤
Calcarisporiella thermophila CBS 279.70tba¤
Rhizomucor pusillus CBS 183.67tba¤

Additional genomes being sequenced for the Genozymes project

Chaetomium thermophilu ATCC 16451
Lentinula edodes ATCC 48564 ( description )
Malbranchea cinnamomea CBS 343.55
Melanocarpus albomyces ATCC 16460
Myceliophthora hinnulea ATCC 52474
Paecilomyces byssochlamydoides NRRL 3658
Rhizomucor miehei CBS 182.67
Stilbella thermophila ATCC 22073
Talaromyces emersonii NRRL 3221
Thermomyces stellatus CBS 241.64
Thielavia australiensis ATCC 28236

Public fungal genomes

Speciessourcedescription
Acremonium alcalophilum JCM 7366 JGI ¤
Aspergillus niger ATCC 1015 JGI
Gloeophyllum trabeum ATCC11539 JGI ¤
Sporotrichum thermophile ATCC 42464 (now Myceliophthora thermophila ) JGI ¤
Phanerochaete chrysosporium RP78 JGI
Thielavia terrestris NRRL 8126 JGI
Aspergillus niger CBS 513.88 NCBI
Chaetomium globosum CBS 148.51 Broad

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